Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FP2_15860Membrane protease subunits, stomatin/prohibitin homologs. (302 aa)    
Predicted Functional Partners:
FP2_15870
Membrane protein implicated in regulation of membrane protease activity.
 
 
 0.964
ftsH
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.835
atpA
Proton translocating ATP synthase, F1 alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
   
 
 0.812
FP2_15850
Conserved hypothetical protein.
       0.766
FP2_05740
Predicted Zn-dependent peptidases.
  
 0.613
FP2_19930
Rhomboid family.
   
 0.512
FP2_01380
Uncharacterized protein conserved in bacteria.
  
  
 0.510
FP2_12050
ATPases of the AAA+ class.
  
 0.422
FP2_15880
Glycosidases.
   
   0.418
FP2_20140
Membrane protein insertase, YidC/Oxa1 family, C-terminal domain.
  
 
 0.416
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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