Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
FP2_16200RND family efflux transporter, MFP subunit. (541 aa)    
Predicted Functional Partners:
FP2_16220
ABC-type antimicrobial peptide transport system, permease component.
 
 
 0.987
FP2_16210
ABC-type antimicrobial peptide transport system, ATPase component.
 
 
 0.958
FP2_13790
ABC-type antimicrobial peptide transport system, permease component.
 
 
 0.949
FP2_19860
Cation/multidrug efflux pump.
  
 
 0.891
FP2_13800
ABC-type antimicrobial peptide transport system, ATPase component.
 
 
 0.833
FP2_13780
S-layer homology domain.
 
     0.776
FP2_16230
S-layer homology domain.
 
     0.775
FP2_18440
ABC-type transport system, involved in lipoprotein release, permease component.
  
 
 0.660
FP2_18450
ABC-type antimicrobial peptide transport system, ATPase component.
  
 
 0.660
FP2_13810
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 
0.560
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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