Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FP2_17420ABC-type multidrug transport system, ATPase component. (286 aa)    
Predicted Functional Partners:
FP2_17410
Hypothetical protein.
 
     0.935
FP2_10790
Transcriptional regulator, GntR family.
 
  
 0.740
FP2_26390
Transcriptional regulator, GntR family.
 
  
 0.634
FP2_08120
Hypothetical protein.
  
 
 0.601
FP2_28500
ABC-type multidrug transport system, ATPase and permease components.
  
  0.568
ecfA-2
ABC-type cobalt transport system, ATPase component; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
   
0.549
FP2_17240
ABC-type multidrug transport system, ATPase and permease components.
  
  0.530
FP2_28330
ABC-type multidrug transport system, ATPase and permease components.
  
  0.473
FP2_13700
ABC-type multidrug transport system, ATPase and permease components.
  
  0.463
FP2_26410
Hypothetical protein.
  
    0.452
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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