Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FP2_17560Transcriptional regulator, GntR family. (372 aa)    
Predicted Functional Partners:
FP2_19280
Glutamate synthase domain 2.
    
 
 0.862
FP2_17570
Arylsulfatase A and related enzymes.
 
     0.854
FP2_17580
Uncharacterized protein conserved in bacteria.
 
     0.753
FP2_17600
Uncharacterized protein conserved in bacteria.
  
     0.722
FP2_27660
Transcriptional regulators.
  
 
 
 0.555
FP2_26730
Uncharacterized protein; PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4).
     
 0.527
FP2_09760
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
 0.508
FP2_08670
Transcriptional regulators.
  
     0.506
FP2_05370
Transcriptional regulator, GntR family.
  
   
 0.477
FP2_11310
Phosphotransferase System HPr (HPr) Family.
   
 
 0.437
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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