STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_17610Nucleotidyltransferase/DNA polymerase involved in DNA repair. (505 aa)    
Predicted Functional Partners:
FP2_17620
YolD-like protein.
 
    0.898
FP2_19990
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
   
   0.790
recA
RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
 0.586
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
 0.584
FP2_07590
DNA polymerase III catalytic subunit, DnaE type.
  
  
 0.544
FP2_17630
Hypothetical protein.
       0.528
FP2_23420
Superfamily II DNA/RNA helicases, SNF2 family.
   
 0.494
FP2_11820
SOS-response transcriptional repressors (RecA-mediated autopeptidases).
  
 
 0.450
FP2_06870
SOS-response transcriptional repressors (RecA-mediated autopeptidases); Belongs to the peptidase S24 family.
  
 
 0.415
FP2_25580
SOS-response transcriptional repressors (RecA-mediated autopeptidases).
  
 
 0.406
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.