STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_17620YolD-like protein. (165 aa)    
Predicted Functional Partners:
FP2_17610
Nucleotidyltransferase/DNA polymerase involved in DNA repair.
 
    0.898
FP2_28730
Hypothetical protein.
  
     0.671
FP2_10940
Hypothetical protein.
  
     0.576
FP2_24490
Fucose 4-O-acetylase and related acetyltransferases.
  
     0.563
FP2_23050
Major Facilitator Superfamily.
  
     0.561
FP2_10910
Uncharacterized protein conserved in bacteria C-term(DUF2220).
  
     0.547
FP2_31380
Gluconolactonase.
  
     0.530
FP2_17630
Hypothetical protein.
       0.528
FP2_13170
Nucleotidyltransferase/DNA polymerase involved in DNA repair.
 
    0.510
FP2_20490
Hypothetical protein.
  
     0.508
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.