Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
FP2_17820Methylase involved in ubiquinone/menaquinone biosynthesis. (227 aa)    
Predicted Functional Partners:
FP2_17830
O-Methyltransferase involved in polyketide biosynthesis.
 
   
 0.846
FP2_17840
Hypothetical protein.
       0.719
FP2_17810
Hypothetical protein.
       0.449
FP2_23140
Predicted glycosyltransferases.
  
 
 0.439
FP2_26530
Predicted glycosyltransferases.
  
 
 0.439
FP2_11640
Transcriptional regulator.
  
 
 0.404
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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