Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FP2_19440Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-). (298 aa)    
Predicted Functional Partners:
FP2_19450
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-).
 
 0.995
FP2_19460
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-).
 
 0.988
FP2_19420
Conserved hypothetical protein TIGR02336.
 
     0.900
FP2_29920
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-).
 
 
 0.894
FP2_24220
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-).
 
 
 0.886
FP2_24740
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-); Belongs to the ABC transporter superfamily.
 
 
 0.863
FP2_19430
Hypothetical protein.
       0.780
FP2_18410
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-).
 
 
 0.744
FP2_29910
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-).
 
 
 0.684
FP2_15750
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-).
 
 
 0.638
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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