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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_19790L-serine ammonia-lyase; Belongs to the iron-sulfur dependent L-serine dehydratase family. (227 aa)    
Predicted Functional Partners:
FP2_25670
L-serine dehydratase, iron-sulfur-dependent, alpha subunit.
 
 0.999
FP2_26200
L-threonine ammonia-lyase.
  
 
 0.922
FP2_15350
Serine O-acetyltransferase.
     
 0.907
FP2_25680
L-serine ammonia-lyase; Belongs to the iron-sulfur dependent L-serine dehydratase family.
  
  
 
0.907
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
  
 
 0.831
FP2_05690
Homoserine dehydrogenase.
   
 
 0.819
metAA
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
     
 0.809
FP2_13960
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
   
 
  0.802
FP2_20900
Lactoylglutathione lyase and related lyases.
   
 
  0.802
tig-2
Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
       0.515
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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