STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_19960D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. (319 aa)    
Predicted Functional Partners:
FP2_19950
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
 
  
 
0.968
FP2_01820
Cell division protein FtsI/penicillin-binding protein 2.
 
 
 0.928
FP2_02610
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
 
  
 
0.928
FP2_30130
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
  
 
0.928
FP2_23180
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
  
 
0.926
FP2_15980
Cell division protein FtsI/penicillin-binding protein 2.
  
 
 0.915
FP2_12250
D-alanyl-D-alanine carboxypeptidase.
     
 0.908
FP2_05000
Cell division protein FtsI/penicillin-binding protein 2.
  
 
 0.573
FP2_19970
Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily.
       0.554
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
  
 
 0.548
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.