STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_21070Small primase-like proteins (Toprim domain). (205 aa)    
Predicted Functional Partners:
FP2_15500
Hypothetical protein.
  
     0.765
FP2_10160
Hypothetical protein.
 
     0.756
FP2_25200
Cell division septal protein.
  
     0.732
FP2_25530
Hypothetical protein.
  
     0.659
FP2_31980
Predicted transcriptional regulators.
  
     0.659
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
 
  
 0.647
FP2_08270
Ribosomal protein S1.
  
     0.638
FP2_07140
Protein of unknown function (DUF964); Belongs to the UPF0342 family.
  
     0.631
FP2_09560
Bacterial membrane protein YfhO.
  
     0.628
FP2_05110
Protein of unknown function (DUF2628).
  
     0.614
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.