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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_21160L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases. (340 aa)    
Predicted Functional Partners:
FP2_21150
Nuclease-related domain./Topoisomerase DNA binding C4 zinc finger.
  
    0.780
FP2_21170
Hypothetical protein.
       0.773
FP2_12070
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
     
 0.747
FP2_09760
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.702
FP2_19990
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
     
 0.536
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
  
  
 0.497
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
  
 0.461
FP2_30600
Ribosomal protein S1.
  
  
 0.449
aroK
Shikimate 5-dehydrogenase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
 
   
 0.435
FP2_12110
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
    
 
 0.426
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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