FP2_21390 protein (Faecalibacterium prausnitzii L26)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

FP2_21390

DNA-binding transcriptional activator of the SARP family. (414 aa)

Predicted Functional Partners:

FP2_22080

0.712

rpoB

0.707

rpoA

0.697

rpoC

0.697

FP2_30080

0.485

FP2_13880

0.476

FP2_29020

0.461

Your Current Organism:

Faecalibacterium prausnitzii L26

NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FP2_13880	FP2_21390	FP2_13880	FP2_21390	RNA polymerase sigma factor, sigma-70 family.	DNA-binding transcriptional activator of the SARP family.	0.476
FP2_13880	rpoA	FP2_13880	FP2_14990	RNA polymerase sigma factor, sigma-70 family.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.778
FP2_13880	rpoB	FP2_13880	FP2_18740	RNA polymerase sigma factor, sigma-70 family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.814
FP2_13880	rpoC	FP2_13880	FP2_18750	RNA polymerase sigma factor, sigma-70 family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.788
FP2_21390	FP2_13880	FP2_21390	FP2_13880	DNA-binding transcriptional activator of the SARP family.	RNA polymerase sigma factor, sigma-70 family.	0.476
FP2_21390	FP2_22080	FP2_21390	FP2_22080	DNA-binding transcriptional activator of the SARP family.	Protein of unknown function (DUF1266).	0.712
FP2_21390	FP2_29020	FP2_21390	FP2_29020	DNA-binding transcriptional activator of the SARP family.	CotH protein.	0.461
FP2_21390	FP2_30080	FP2_21390	FP2_30080	DNA-binding transcriptional activator of the SARP family.	RNA polymerase sigma factor, sigma-70 family.	0.485
FP2_21390	rpoA	FP2_21390	FP2_14990	DNA-binding transcriptional activator of the SARP family.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.697
FP2_21390	rpoB	FP2_21390	FP2_18740	DNA-binding transcriptional activator of the SARP family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.707
FP2_21390	rpoC	FP2_21390	FP2_18750	DNA-binding transcriptional activator of the SARP family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.697
FP2_22080	FP2_21390	FP2_22080	FP2_21390	Protein of unknown function (DUF1266).	DNA-binding transcriptional activator of the SARP family.	0.712
FP2_22080	FP2_29020	FP2_22080	FP2_29020	Protein of unknown function (DUF1266).	CotH protein.	0.695
FP2_29020	FP2_21390	FP2_29020	FP2_21390	CotH protein.	DNA-binding transcriptional activator of the SARP family.	0.461
FP2_29020	FP2_22080	FP2_29020	FP2_22080	CotH protein.	Protein of unknown function (DUF1266).	0.695
FP2_30080	FP2_21390	FP2_30080	FP2_21390	RNA polymerase sigma factor, sigma-70 family.	DNA-binding transcriptional activator of the SARP family.	0.485
FP2_30080	rpoA	FP2_30080	FP2_14990	RNA polymerase sigma factor, sigma-70 family.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.778
FP2_30080	rpoB	FP2_30080	FP2_18740	RNA polymerase sigma factor, sigma-70 family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.814
FP2_30080	rpoC	FP2_30080	FP2_18750	RNA polymerase sigma factor, sigma-70 family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.788
rpoA	FP2_13880	FP2_14990	FP2_13880	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor, sigma-70 family.	0.778

page 1 of 2

Server load: low (12%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Co-occurrence

Textmining

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About