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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_22560Glycosyltransferases involved in cell wall biogenesis. (342 aa)    
Predicted Functional Partners:
FP2_22550
ATP-dependent DNA helicase, RecQ family.
   
   0.522
FP2_23310
PAP2 superfamily.
 
  
 0.495
FP2_16040
UDP-galactopyranose mutase.
 
  
 0.493
FP2_23150
ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
 
  
 0.453
FP2_20390
PAP2 superfamily.
 
  
 0.440
FP2_05850
Sugar transferases involved in lipopolysaccharide synthesis.
  
  
 0.437
FP2_22570
Transporter, CPA2 family (2.A.37).
       0.421
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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