STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_22930Hypothetical protein. (40 aa)    
Predicted Functional Partners:
FP2_22940
Malic enzyme.
  
  
 0.793
FP2_22910
Hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region.
  
 
 0.772
FP2_19990
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
  
  
 0.609
FP2_22920
Fumarase alpha subunit.
       0.545
FP2_29800
Succinate dehydrogenase and fumarate reductase iron-sulfur protein.
  
  
 0.523
FP2_20700
Uncharacterized protein conserved in bacteria.
  
  
 0.514
FP2_23780
Uncharacterized protein conserved in bacteria.
  
  
 0.514
FP2_29160
TAT (twin-arginine translocation) pathway signal sequence.
  
  
 0.462
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.