Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
FP2_23310PAP2 superfamily. (218 aa)    
Predicted Functional Partners:
FP2_07750
Farnesyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.576
FP2_30600
Ribosomal protein S1.
  
  
 0.576
FP2_02530
Glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
  
 0.574
FP2_23300
HAD-superfamily hydrolase, subfamily IIB.
  
    0.539
FP2_22560
Glycosyltransferases involved in cell wall biogenesis.
 
  
 0.502
FP2_23320
Transcriptional regulators.
       0.493
FP2_08270
Ribosomal protein S1.
   
    0.471
FP2_23140
Predicted glycosyltransferases.
  
  
 0.422
FP2_26530
Predicted glycosyltransferases.
  
  
 0.422
FP2_01680
Putative efflux protein, MATE family.
   
    0.414
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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