Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
FP2_23710Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (225 aa)    
Predicted Functional Partners:
FP2_23700
Signal transduction histidine kinase.
 
 
 0.972
FP2_23740
AhpC/TSA family.
 
  
 0.857
FP2_23730
Hypothetical protein.
 
   
 0.844
FP2_23720
Hypothetical protein.
 
    0.821
FP2_20720
Signal transduction histidine kinase.
 
   0.766
FP2_12540
Signal transduction histidine kinase.
 
 
 0.761
FP2_07520
Signal transduction histidine kinase.
 
 
 0.719
FP2_31400
Signal transduction histidine kinase.
 
 
 0.708
FP2_15030
Signal transduction histidine kinase.
 
 
 0.689
FP2_25480
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 0.604
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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