Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FP2_23720Hypothetical protein. (48 aa)    
Predicted Functional Partners:
FP2_23740
AhpC/TSA family.
 
     0.928
FP2_23730
Hypothetical protein.
 
     0.920
FP2_23700
Signal transduction histidine kinase.
 
     0.882
FP2_23710
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
    0.821
FP2_23670
Conserved hypothetical integral membrane protein TIGR02185.
  
     0.594
msrA-2
methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
       0.538
FP2_27870
Hypothetical protein.
  
     0.454
FP2_08310
Hypothetical protein.
  
     0.447
FP2_23680
Cobalt transport protein.
  
     0.435
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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