STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_23930Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (138 aa)    
Predicted Functional Partners:
FP2_23920
Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
       0.773
ribH
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
       0.718
ribBA
GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
 0.680
FP2_15020
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
     0.665
FP2_25390
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
     0.664
FP2_20710
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
     0.641
FP2_12550
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
     0.633
FP2_07520
Signal transduction histidine kinase.
 
 
 0.610
FP2_27590
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
     0.596
FP2_20720
Signal transduction histidine kinase.
 
   0.593
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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