Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FP2_24260ATP-dependent Clp protease proteolytic subunit ClpP. (228 aa)    
Predicted Functional Partners:
clpX
ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
  
 0.941
FP2_07640
Stage III sporulation protein AC.
  
   
 0.789
FP2_06250
Sporulation protein, YlmC/YmxH family.
 
   
 0.784
FP2_12360
Transcriptional regulator, AbrB family.
  
   
 0.777
FP2_07620
Uncharacterized protein conserved in bacteria.
  
     0.774
FP2_08190
Stage IV sporulation protein B.
  
     0.773
FP2_12220
SpoVA protein.
  
     0.771
FP2_12240
Stage V sporulation protein AC.
  
     0.771
FP2_01970
Stage II sporulation protein R (spore_II_R).
  
     0.770
FP2_27470
Stage III sporulation protein D.
  
     0.770
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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