Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FP2_24670Tripartite ATP-independent periplasmic transporter solute receptor, DctP family. (332 aa)    
Predicted Functional Partners:
FP2_24680
TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
  
 
0.955
FP2_24700
TRAP transporter, DctM subunit.
 
  
 0.874
FP2_24150
TRAP-type C4-dicarboxylate transport system, small permease component.
 
  
 0.854
FP2_24160
TRAP transporter, DctM subunit.
 
  
 0.825
FP2_24650
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain.
       0.768
FP2_24660
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
       0.768
FP2_24690
TRAP-type C4-dicarboxylate transport system, small permease component.
 
  
 0.765
FP2_08590
Hypothetical protein.
   
 
 0.575
FP2_24640
Hypothetical protein.
       0.488
FP2_17580
Uncharacterized protein conserved in bacteria.
  
     0.425
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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