Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FP2_24960Predicted dehydrogenases and related proteins. (359 aa)    
Predicted Functional Partners:
FP2_24950
Sugar phosphate isomerases/epimerases.
 
  
 0.826
FP2_24930
Sugar phosphate isomerases/epimerases.
 
  
 0.725
FP2_25880
Predicted dehydrogenases and related proteins.
  
     0.586
FP2_24940
H+/gluconate symporter and related permeases.
  
    0.558
lysS
Lysyl-tRNA synthetase (class II); Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.538
FP2_24970
Transcriptional regulator, GntR family.
       0.423
FP2_19990
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
     
 0.420
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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