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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_24960Predicted dehydrogenases and related proteins. (359 aa)    
Predicted Functional Partners:
FP2_24950
Sugar phosphate isomerases/epimerases.
 
  
 0.883
FP2_24930
Sugar phosphate isomerases/epimerases.
 
  
 0.824
FP2_25880
Predicted dehydrogenases and related proteins.
  
     0.586
FP2_24940
H+/gluconate symporter and related permeases.
  
    0.561
lysS
Lysyl-tRNA synthetase (class II); Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.526
FP2_31560
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.524
FP2_05880
Sugar phosphate isomerases/epimerases.
  
  
 0.502
FP2_26570
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.500
FP2_08640
Sugar kinases, ribokinase family; Belongs to the carbohydrate kinase PfkB family.
  
  
 0.476
FP2_13980
Sugar kinases, ribokinase family.
  
  
 0.476
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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