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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_25440Putative GTPases (G3E family). (311 aa)    
Predicted Functional Partners:
rpsZ
Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
  
 
 0.605
FP2_02740
Hypothetical protein.
 
  
 0.604
FP2_01240
Hypothetical protein.
  
     0.539
FP2_25450
Predicted membrane protein.
       0.532
rpmB
LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.530
FP2_25430
Carbonic anhydrase.
       0.511
FP2_02830
Precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit/precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit.
     
 0.487
rpmG
LSU ribosomal protein L33P; Belongs to the bacterial ribosomal protein bL33 family.
  
  
 0.462
FP2_32380
CobW/HypB/UreG, nucleotide-binding domain.
 
     0.462
FP2_02730
Cobalamin biosynthesis protein CbiK, Co2+ chelatase.
  
   
 0.439
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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