Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
FP2_27600Signal transduction histidine kinase. (345 aa)    
Predicted Functional Partners:
FP2_27590
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
   0.969
FP2_27620
ABC-type transport system, involved in lipoprotein release, permease component.
 
 
 
 0.922
FP2_27610
ABC-type antimicrobial peptide transport system, ATPase component.
 
 
 0.895
FP2_31390
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
   0.809
FP2_20710
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
   0.802
FP2_12550
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
   0.797
FP2_15020
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
   0.797
FP2_18440
ABC-type transport system, involved in lipoprotein release, permease component.
  
 
 0.760
FP2_18450
ABC-type antimicrobial peptide transport system, ATPase component.
  
 
 0.760
FP2_19490
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
   0.740
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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