STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_27610ABC-type antimicrobial peptide transport system, ATPase component. (227 aa)    
Predicted Functional Partners:
FP2_27620
ABC-type transport system, involved in lipoprotein release, permease component.
 
 
 0.974
FP2_13790
ABC-type antimicrobial peptide transport system, permease component.
 
 0.963
FP2_18440
ABC-type transport system, involved in lipoprotein release, permease component.
 
 0.961
FP2_16220
ABC-type antimicrobial peptide transport system, permease component.
 
 0.956
FP2_27600
Signal transduction histidine kinase.
 
 
 0.895
FP2_11710
ABC-type multidrug transport system, ATPase and permease components.
 
    
0.760
FP2_27590
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
   
 0.759
FP2_18450
ABC-type antimicrobial peptide transport system, ATPase component.
  
 
 0.532
FP2_19060
ABC-type multidrug transport system, ATPase and permease components.
 
    
0.516
FP2_25930
Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
    
 0.488
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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