Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FP2_27660Transcriptional regulators. (267 aa)    
Predicted Functional Partners:
FP2_19700
Transcriptional regulators.
  
  
 0.762
FP2_05370
Transcriptional regulator, GntR family.
  
  
 0.715
FP2_30830
Transcriptional regulators.
 
  
 0.588
FP2_17560
Transcriptional regulator, GntR family.
  
 
 
 0.555
FP2_27650
Hypothetical protein.
       0.533
FP2_20020
Transcriptional regulators.
 
  
 0.474
FP2_27960
Transcriptional regulators.
  
  
0.467
FP2_23320
Transcriptional regulators.
 
  
 0.459
FP2_27670
L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
     
 0.437
FP2_18430
Transcriptional regulators.
  
 
 
 0.428
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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