Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FP2_28070Uncharacterized conserved protein related to MYG1 family. (275 aa)    
Predicted Functional Partners:
FP2_28080
Predicted endonuclease containing a URI domain.
       0.780
FP2_26370
Hypothetical protein.
  
     0.575
prfA
Bacterial peptide chain release factor 1 (bRF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
    
   0.538
FP2_06340
Lysophospholipase L1 and related esterases.
  
     0.525
FP2_28060
Hypothetical protein.
       0.499
FP2_29800
Succinate dehydrogenase and fumarate reductase iron-sulfur protein.
  
    0.497
FP2_06170
Hypothetical protein.
  
     0.472
FP2_19880
Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits.
   
    0.471
FP2_26830
Hypothetical protein.
   
    0.471
FP2_02050
Protein of unknown function (DUF1292).
  
     0.468
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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