Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FP2_28620Hypothetical protein. (460 aa)    
Predicted Functional Partners:
FP2_28640
Uncharacterized protein conserved in bacteria.
 
     0.842
FP2_28630
AAA domain (dynein-related subfamily).
 
    0.815
FP2_28730
Hypothetical protein.
  
 
   0.766
FP2_24490
Fucose 4-O-acetylase and related acetyltransferases.
  
     0.755
FP2_10910
Uncharacterized protein conserved in bacteria C-term(DUF2220).
  
     0.743
FP2_20470
SMC proteins Flexible Hinge Domain.
  
     0.736
FP2_20480
Hypothetical protein.
  
     0.735
FP2_20490
Hypothetical protein.
  
     0.735
FP2_31380
Gluconolactonase.
  
     0.734
FP2_10940
Hypothetical protein.
  
     0.717
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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