Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FP2_28760ABC-type dipeptide/oligopeptide/nickel transport systems, permease components. (317 aa)    
Predicted Functional Partners:
FP2_28750
ABC-type dipeptide transport system, periplasmic component.
 0.992
FP2_11560
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 0.990
FP2_28780
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 0.988
FP2_28930
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.917
FP2_14210
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.910
FP2_15580
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
 0.903
FP2_31120
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.903
FP2_26800
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
 0.896
FP2_28940
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component.
 
 
 0.891
FP2_28790
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; Belongs to the ABC transporter superfamily.
 
 
 0.889
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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