STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_29910Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-). (439 aa)    
Predicted Functional Partners:
FP2_29930
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-).
 
 
 0.899
FP2_29920
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-).
 
 
 0.873
FP2_08760
ABC-type sugar transport system, permease component.
 
 
 0.829
FP2_24220
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-).
 
 
 0.818
FP2_24210
ABC-type sugar transport system, permease component.
 
 
 0.771
FP2_29870
Hypothetical protein.
 
     0.733
FP2_08770
ABC-type polysaccharide transport system, permease component.
 
  
 0.712
FP2_29880
Heparinase II/III-like protein.
 
    0.692
FP2_19440
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-).
 
 
 0.684
FP2_29890
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
 
     0.683
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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