| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| FP2_12470 | infB | FP2_12470 | FP2_30280 | Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.459 |
| FP2_12470 | pnp | FP2_12470 | FP2_30360 | Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.866 |
| FP2_12470 | rplB | FP2_12470 | FP2_14740 | Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.558 |
| FP2_12470 | rplC | FP2_12470 | FP2_14710 | Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.947 |
| FP2_12470 | rplD | FP2_12470 | FP2_14720 | Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | 0.792 |
| FP2_12470 | rpoA | FP2_12470 | FP2_14990 | Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.780 |
| FP2_12470 | rpoB | FP2_12470 | FP2_18740 | Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.754 |
| FP2_12470 | rpsD | FP2_12470 | FP2_14980 | Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.891 |
| FP2_15460 | infB | FP2_15460 | FP2_30280 | Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.459 |
| FP2_15460 | pnp | FP2_15460 | FP2_30360 | Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.866 |
| FP2_15460 | rplB | FP2_15460 | FP2_14740 | Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.558 |
| FP2_15460 | rplC | FP2_15460 | FP2_14710 | Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.947 |
| FP2_15460 | rplD | FP2_15460 | FP2_14720 | Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | 0.792 |
| FP2_15460 | rpoA | FP2_15460 | FP2_14990 | Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.780 |
| FP2_15460 | rpoB | FP2_15460 | FP2_18740 | Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.754 |
| FP2_15460 | rpsD | FP2_15460 | FP2_14980 | Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.891 |
| infB | FP2_12470 | FP2_30280 | FP2_12470 | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | 0.459 |
| infB | FP2_15460 | FP2_30280 | FP2_15460 | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. | 0.459 |
| infB | nusA | FP2_30280 | FP2_30250 | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | 0.988 |
| infB | pnp | FP2_30280 | FP2_30360 | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.907 |
STRING v12.5 is now available!
