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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_30440Glycosyltransferases involved in cell wall biogenesis. (326 aa)    
Predicted Functional Partners:
FP2_30430
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.
       0.782
FP2_09560
Bacterial membrane protein YfhO.
 
  
 0.672
FP2_30450
CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator; cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
       0.642
FP2_30610
GtrA-like protein.
 
  
 0.597
FP2_30460
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
       0.439
FP2_05850
Sugar transferases involved in lipopolysaccharide synthesis.
  
  
 0.437
FP2_23150
ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
 
  
 0.407
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.