STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_30460ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components. (339 aa)    
Predicted Functional Partners:
FP2_30480
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 
 0.994
FP2_30450
CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator; cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
 
   
 0.666
FP2_30430
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.
  
  
 0.541
FP2_19280
Glutamate synthase domain 2.
   
  
 0.478
FP2_30440
Glycosyltransferases involved in cell wall biogenesis.
       0.440
FP2_02590
Iron only hydrogenase large subunit, C-terminal domain.
 
     0.429
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.