STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FP2_30940Predicted dehydrogenases and related proteins. (321 aa)    
Predicted Functional Partners:
FP2_30950
AraC-type DNA-binding domain-containing proteins.
 
    0.725
lysS
Lysyl-tRNA synthetase (class II); Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.538
FP2_30930
Ketose-bisphosphate aldolases.
  
  
 0.528
FP2_30960
PTS system, mannose/fructose/sorbose family, IIB component.
 
     0.498
FP2_18550
Galactokinase; Belongs to the GHMP kinase family.
 
 
 0.464
FP2_30980
PTS system IID component, Man family (TC 4.A.6).
 
     0.454
FP2_18360
Galactokinase; Belongs to the GHMP kinase family.
 
 
 0.448
FP2_19990
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
     
 0.420
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.