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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_30950AraC-type DNA-binding domain-containing proteins. (399 aa)    
Predicted Functional Partners:
FP2_30940
Predicted dehydrogenases and related proteins.
 
    0.727
FP2_08900
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
  
     0.678
FP2_11520
AraC-type DNA-binding domain-containing proteins.
  
     0.676
FP2_32190
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
  
     0.662
FP2_30960
PTS system, mannose/fructose/sorbose family, IIB component.
 
     0.660
FP2_30900
Galactosamine 6-phosphate isomerase AgaS.
  
     0.622
FP2_30970
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC.
 
     0.619
FP2_30990
Predicted phosphatase/phosphohexomutase.
 
    0.591
FP2_30980
PTS system IID component, Man family (TC 4.A.6).
 
     0.579
FP2_30880
Tagatose-bisphosphate aldolase noncatalytic subunit.
  
     0.547
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.