STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_31950Protein of unknown function (DUF3048). (365 aa)    
Predicted Functional Partners:
FP2_31940
Protein of unknown function (DUF3048).
 
    
0.802
FP2_16230
S-layer homology domain.
 
   
 0.653
FP2_13780
S-layer homology domain.
 
   
 0.618
FP2_28620
Hypothetical protein.
  
   0.601
FP2_11990
Hypothetical protein.
  
     0.578
FP2_11320
Hypothetical protein.
  
     0.565
FP2_05230
Hypothetical protein.
  
 
 0.557
FP2_02720
Helicase associated domain.
  
     0.533
FP2_26850
Hypothetical protein.
  
     0.531
FP2_08100
Hypothetical protein.
  
     0.522
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.