STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hisIphosphoribosyl-ATP pyrophosphatase; In the N-terminal section; belongs to the PRA-CH family. (211 aa)    
Predicted Functional Partners:
FP2_02910
Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase.
 
  
 0.972
FP2_32050
Histidinol phosphate phosphatase HisJ family; Belongs to the PHP hydrolase family. HisK subfamily.
 
  
 0.953
tadA
tRNA-adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
   
  
 0.915
rpmE
LSU ribosomal protein L31P; Binds the 23S rRNA.
  
  
 0.867
FP2_01540
Phosphoribosylformylglycinamidine synthase.
  
  
 0.764
FP2_18610
Histidinol phosphate phosphatase HisJ family; Belongs to the PHP hydrolase family. HisK subfamily.
 
  
 0.752
metAA
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
  
    0.749
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
 
  
 0.713
FP2_19280
Glutamate synthase domain 2.
 
  
 0.709
FP2_27030
Methionine synthase I (cobalamin-dependent), methyltransferase domain.
  
  
 0.706
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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