STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPDC2Popeye domain-containing protein 2. (368 aa)    
Predicted Functional Partners:
TMEM161A
Transmembrane protein 161A.
      
 0.795
RHBDD1
Rhomboid domain-containing protein 1.
    
 
 0.763
TMEM214
Transmembrane protein 214.
      
 0.754
KLHL31
Kelch-like protein 31.
   
  
 0.753
TMEM70
Transmembrane protein 70, mitochondrial.
      
 0.738
CKAP4
Cytoskeleton-associated protein 4.
      
 0.558
MRPL16
39S ribosomal protein L16, mitochondrial.
      
 0.535
CBR4
Carbonyl reductase family member 4.
      
 0.535
TMEM38A
Trimeric intracellular cation channel type A.
   
  
 0.534
TMX4
Thioredoxin-related transmembrane protein 4.
      
 0.526
Your Current Organism:
Bos mutus
NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak
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