STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC159Coiled-coil domain-containing protein 159. (297 aa)    
Predicted Functional Partners:
CCDC146
Coiled-coil domain-containing protein 146.
      
 0.576
RNF7
RING-box protein 2.
      
 0.512
SASH1
SAM and SH3 domain containing 1.
      
 0.511
GAST
Gastrin.
  
     0.494
LOC102271603
Annexin.
      
 0.468
MPZ
Myelin protein P0.
      
 0.439
IGSF8
Immunoglobulin superfamily, member 8.
  
     0.404
Your Current Organism:
Bos mutus
NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.