STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPDR1Ependymin related 1. (257 aa)    
Predicted Functional Partners:
TSKU
Tsukushin.
      
 0.711
HECW1
E3 ubiquitin-protein ligase HECW1.
      
 0.688
TOX4
TOX high mobility group box family member 4.
      
 0.623
CREG1
Protein CREG1.
      
 0.622
TDRP
Uncharacterized protein.
      
 0.622
TOR3A
Torsin-3A.
      
 0.603
TRAT1
T-cell receptor-associated transmembrane adapter 1.
      
 0.547
LACC1
Uncharacterized protein.
      
 0.538
STARD3NL
MENTAL domain-containing protein.
      
 0.528
HECW2
E3 ubiquitin-protein ligase HECW2.
      
 0.519
Your Current Organism:
Bos mutus
NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.