Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RIMKLARibosomal protein S6 modification-like protein A. (391 aa)    
Predicted Functional Partners:
ASPA
Aspartoacylase.
     
 0.935
FOLH1
Glutamate carboxypeptidase 2.
     
 0.925
RIMKLB
Ribosomal protein S6 modification-like protein B.
     
  0.915
IDH3A
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
    
 0.773
NAALAD2
N-acetylated-alpha-linked acidic dipeptidase 2.
     
 0.767
MDH2
Malate dehydrogenase.
    
 0.751
MDH1
Malate dehydrogenase.
    
 0.736
IDH2
Isocitrate dehydrogenase [NADP], mitochondrial.
     
 0.729
IDH1
Isocitrate dehydrogenase [NADP] cytoplasmic.
     
 0.729
NAT8
Putative N-acetyltransferase 8B.
     
 0.721
Your Current Organism:
Bos mutus
NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak
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