Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSBMUP00000002594 | GOSR1 | ENSBMUP00000002594 | ENSBMUP00000012368 | annotation not available | Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. | 0.974 |
ENSBMUP00000002594 | GOSR2 | ENSBMUP00000002594 | ENSBMUP00000002307 | annotation not available | Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network. | 0.977 |
ENSBMUP00000002594 | SCFD1 | ENSBMUP00000002594 | ENSBMUP00000009406 | annotation not available | Sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family. | 0.970 |
ENSBMUP00000002594 | SEC22A | ENSBMUP00000002594 | ENSBMUP00000017278 | annotation not available | Vesicle-trafficking protein SEC22a; Belongs to the synaptobrevin family. | 0.886 |
ENSBMUP00000002594 | SEC22B | ENSBMUP00000002594 | ENSBMUP00000016195 | annotation not available | Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family. | 0.926 |
ENSBMUP00000002594 | SEC22C | ENSBMUP00000002594 | ENSBMUP00000023186 | annotation not available | Vesicle-trafficking protein SEC22c; Belongs to the synaptobrevin family. | 0.861 |
ENSBMUP00000002594 | STX5 | ENSBMUP00000002594 | ENSBMUP00000031541 | annotation not available | Syntaxin-5; Belongs to the syntaxin family. | 0.977 |
ENSBMUP00000002594 | USO1 | ENSBMUP00000002594 | ENSBMUP00000022624 | annotation not available | General vesicular transport factor p115. | 0.938 |
ENSBMUP00000002594 | VAMP8 | ENSBMUP00000002594 | ENSBMUP00000034283 | annotation not available | Vesicle-associated membrane protein 8. | 0.820 |
ENSBMUP00000002594 | YKT6 | ENSBMUP00000002594 | ENSBMUP00000035328 | annotation not available | Synaptobrevin-like protein YKT6; Belongs to the synaptobrevin family. | 0.962 |
GOSR1 | ENSBMUP00000002594 | ENSBMUP00000012368 | ENSBMUP00000002594 | Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. | annotation not available | 0.974 |
GOSR1 | GOSR2 | ENSBMUP00000012368 | ENSBMUP00000002307 | Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. | Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network. | 0.997 |
GOSR1 | SCFD1 | ENSBMUP00000012368 | ENSBMUP00000009406 | Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. | Sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family. | 0.973 |
GOSR1 | SEC22A | ENSBMUP00000012368 | ENSBMUP00000017278 | Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. | Vesicle-trafficking protein SEC22a; Belongs to the synaptobrevin family. | 0.774 |
GOSR1 | SEC22B | ENSBMUP00000012368 | ENSBMUP00000016195 | Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. | Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family. | 0.939 |
GOSR1 | SEC22C | ENSBMUP00000012368 | ENSBMUP00000023186 | Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. | Vesicle-trafficking protein SEC22c; Belongs to the synaptobrevin family. | 0.851 |
GOSR1 | STX5 | ENSBMUP00000012368 | ENSBMUP00000031541 | Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. | Syntaxin-5; Belongs to the syntaxin family. | 0.997 |
GOSR1 | USO1 | ENSBMUP00000012368 | ENSBMUP00000022624 | Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. | General vesicular transport factor p115. | 0.973 |
GOSR1 | VAMP8 | ENSBMUP00000012368 | ENSBMUP00000034283 | Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. | Vesicle-associated membrane protein 8. | 0.969 |
GOSR1 | YKT6 | ENSBMUP00000012368 | ENSBMUP00000035328 | Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. | Synaptobrevin-like protein YKT6; Belongs to the synaptobrevin family. | 0.991 |
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