Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABT1 | CDH20 | ENSBMUP00000032639 | ENSBMUP00000012002 | Activator of basal transcription 1. | Cadherin-20; Cadherins are calcium-dependent cell adhesion proteins. | 0.625 |
ABT1 | NOM1 | ENSBMUP00000032639 | ENSBMUP00000003027 | Activator of basal transcription 1. | Nucleolar MIF4G domain-containing protein 1. | 0.950 |
ABT1 | RNF32 | ENSBMUP00000032639 | ENSBMUP00000003330 | Activator of basal transcription 1. | RING finger protein 32. | 0.704 |
CDH20 | ABT1 | ENSBMUP00000012002 | ENSBMUP00000032639 | Cadherin-20; Cadherins are calcium-dependent cell adhesion proteins. | Activator of basal transcription 1. | 0.625 |
CDH20 | RNF32 | ENSBMUP00000012002 | ENSBMUP00000003330 | Cadherin-20; Cadherins are calcium-dependent cell adhesion proteins. | RING finger protein 32. | 0.543 |
CHKA | KIAA0100 | ENSBMUP00000006382 | ENSBMUP00000010035 | Choline kinase alpha. | UPF0378 protein KIAA0100. | 0.544 |
CHKA | RNF32 | ENSBMUP00000006382 | ENSBMUP00000003330 | Choline kinase alpha. | RING finger protein 32. | 0.530 |
KIAA0100 | CHKA | ENSBMUP00000010035 | ENSBMUP00000006382 | UPF0378 protein KIAA0100. | Choline kinase alpha. | 0.544 |
KIAA0100 | MCTP1 | ENSBMUP00000010035 | ENSBMUP00000014130 | UPF0378 protein KIAA0100. | Multiple C2 and transmembrane domain-containing protein 1. | 0.782 |
KIAA0100 | RNF32 | ENSBMUP00000010035 | ENSBMUP00000003330 | UPF0378 protein KIAA0100. | RING finger protein 32. | 0.741 |
LMBR1 | MCTP1 | ENSBMUP00000003138 | ENSBMUP00000014130 | Limb region 1 protein-like protein; Belongs to the LIMR family. | Multiple C2 and transmembrane domain-containing protein 1. | 0.755 |
LMBR1 | NOM1 | ENSBMUP00000003138 | ENSBMUP00000003027 | Limb region 1 protein-like protein; Belongs to the LIMR family. | Nucleolar MIF4G domain-containing protein 1. | 0.606 |
LMBR1 | RNF32 | ENSBMUP00000003138 | ENSBMUP00000003330 | Limb region 1 protein-like protein; Belongs to the LIMR family. | RING finger protein 32. | 0.626 |
MCTP1 | KIAA0100 | ENSBMUP00000014130 | ENSBMUP00000010035 | Multiple C2 and transmembrane domain-containing protein 1. | UPF0378 protein KIAA0100. | 0.782 |
MCTP1 | LMBR1 | ENSBMUP00000014130 | ENSBMUP00000003138 | Multiple C2 and transmembrane domain-containing protein 1. | Limb region 1 protein-like protein; Belongs to the LIMR family. | 0.755 |
MCTP1 | RNF32 | ENSBMUP00000014130 | ENSBMUP00000003330 | Multiple C2 and transmembrane domain-containing protein 1. | RING finger protein 32. | 0.531 |
NOM1 | ABT1 | ENSBMUP00000003027 | ENSBMUP00000032639 | Nucleolar MIF4G domain-containing protein 1. | Activator of basal transcription 1. | 0.950 |
NOM1 | LMBR1 | ENSBMUP00000003027 | ENSBMUP00000003138 | Nucleolar MIF4G domain-containing protein 1. | Limb region 1 protein-like protein; Belongs to the LIMR family. | 0.606 |
NOM1 | RNF32 | ENSBMUP00000003027 | ENSBMUP00000003330 | Nucleolar MIF4G domain-containing protein 1. | RING finger protein 32. | 0.633 |
PRAM1 | RNF32 | ENSBMUP00000034594 | ENSBMUP00000003330 | PML-RARA-regulated adapter molecule 1. | RING finger protein 32. | 0.557 |
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