STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIPOR1Protein FAM65A. (1330 aa)    
Predicted Functional Partners:
NDUFS6
NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial.
    
   0.929
LOC102287792
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12.
    
   0.766
NDUFA12
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
    
   0.766
PDCD10
Programmed cell death protein 10.
   
 
 0.683
PSKH1
Serine/threonine-protein kinase H1; Belongs to the protein kinase superfamily.
      
 0.676
STK26
Serine/threonine kinase 26.
    
 
 0.673
STK25
Serine/threonine-protein kinase 25.
    
 
 0.669
ZMYM5
Zinc finger MYM-type protein 5.
    
 0.656
PPP4R3B
Serine/threonine-protein phosphatase 4 regulatory subunit 3B.
      
 0.611
EDC4
Enhancer of mRNA-decapping protein 4.
   
  
 0.557
Your Current Organism:
Bos mutus
NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak
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