STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAZ1ABromodomain adjacent to zinc finger domain protein 1A. (1557 aa)    
Predicted Functional Partners:
POLE3
DNA polymerase epsilon subunit 3.
    
 
 0.950
SMARCA5
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5.
    
 0.933
SMARCA1
Putative global transcription activator SNF2L1.
    
 0.885
ENSBMUP00000013765
annotation not available
   
 
 0.803
CHRAC1
Chromatin accessibility complex protein 1.
   
 
 0.803
CHD1L
Chromodomain-helicase-DNA-binding protein 1-like protein.
    
 0.689
HELLS
Lymphoid-specific helicase.
    
 0.684
CHD6
Chromodomain-helicase-DNA-binding protein 6.
   
 0.632
ERCC6
DNA excision repair protein ERCC-6.
    
 0.609
CHD1
Chromodomain-helicase-DNA-binding protein 1.
   
 0.598
Your Current Organism:
Bos mutus
NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.