STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRSF1G-rich sequence factor 1. (362 aa)    
Predicted Functional Partners:
MGME1
Mitochondrial genome maintenance exonuclease 1; Metal-dependent single-stranded DNA (ssDNA) exonuclease involved in mitochondrial genome maintenance. Has preference for 5'-3' exonuclease activity but is also capable of endoduclease activity on linear substrates. Necessary for maintenance of proper 7S DNA levels. Probably involved in mitochondrial DNA (mtDNA) repair, possibly via the processing of displaced DNA containing Okazaki fragments during RNA- primed DNA synthesis on the lagging strand or via processing of DNA flaps during long-patch base excision repair; Belongs to the MGME1 family.
    
 
 0.724
DDX28
Putative ATP-dependent RNA helicase DDX28.
   
 0.662
SLIRP
SRA stem-loop interacting RNA binding protein.
   
 0.640
DHX30
Putative ATP-dependent RNA helicase DHX30.
    
 
 0.627
ND6
NADH-ubiquinone oxidoreductase chain 6.
      
 0.619
FASTKD2
FAST kinase domain-containing protein 2.
    
 
 0.617
IGBP1
Immunoglobulin binding protein 1.
      
 0.616
SURF6
SURF6 domain-containing protein.
    
 
 0.613
TRMT10C
Mitochondrial ribonuclease P protein 1.
   
 
 0.607
CNIH1
Protein cornichon-like protein.
      
 0.601
Your Current Organism:
Bos mutus
NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.