STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIMD1LIM domains containing 1. (657 aa)    
Predicted Functional Partners:
HAUS3
HAUS augmin-like complex subunit 3.
   
 0.657
HAUS1
HAUS augmin-like complex subunit 1.
   
 0.653
HAUS8
HAUS augmin-like complex subunit 8.
    
 0.628
PDLIM4
PDZ and LIM domain protein 4.
   
 
 0.616
LOC102271501
SHC SH2 domain-binding protein 1-like protein.
   
  
 0.602
LATS1
Serine/threonine-protein kinase LATS1.
    
 
 0.579
VHL
Von Hippel-Lindau disease tumor suppressor.
    
 0.573
HAUS5
HAUS augmin-like complex subunit 5.
   
 0.568
RBM42
RNA-binding protein 42.
   
 0.568
LATS2
Large tumor suppressor kinase 2.
    
 
 0.560
Your Current Organism:
Bos mutus
NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.