STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLSTN3Calsyntenin-3. (1049 aa)    
Predicted Functional Partners:
SH3BP5L
SH3 domain-binding protein 5-like protein.
      
 0.773
LRRTM1
Leucine-rich repeat transmembrane neuronal protein 1.
   
  
 0.765
TELO2
Telomere length regulation protein TEL2-like protein.
      
 0.729
SNCAIP
Synphilin-1.
     
 0.679
CDH18
Cadherin-18; Cadherins are calcium-dependent cell adhesion proteins.
   
  
 0.638
IGSF21
Immunoglobin superfamily member 21.
   
 0.637
ANTXR1
Anthrax toxin receptor 1.
    
 
 0.628
C1RL
Complement C1r subcomponent-like protein; Belongs to the peptidase S1 family.
     
 0.623
PEX5
Peroxisomal targeting signal 1 receptor.
   
  
 0.616
USP5
Ubiquitin carboxyl-terminal hydrolase 5/13.
      
 0.610
Your Current Organism:
Bos mutus
NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.