STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERPINF1Pigment epithelium-derived factor; Belongs to the serpin family. (416 aa)    
Predicted Functional Partners:
LRP6
Low-density lipoprotein receptor-related protein 6.
    
 0.918
LRP5L
Low-density lipoprotein receptor-related protein 5.
    
 0.915
FMOD
Fibromodulin.
   
 
 0.664
F2
Prothrombin; Belongs to the peptidase S1 family.
   
 0.608
ENSBMUP00000003314
annotation not available
  
 0.579
LOC102267682
Serpin B3-like.
  
  0.575
M91_09558
SERPIN domain-containing protein; Belongs to the serpin family.
  
  0.562
ENSBMUP00000003296
annotation not available
  
  0.548
CRTAP
Cartilage associated protein.
     
 0.547
FKBP10
Peptidylprolyl isomerase.
   
 
 0.533
Your Current Organism:
Bos mutus
NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.