PCF11 protein (Bos mutus) - STRING interaction network

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Predicted Interactions

gene neighborhood

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Score

PCF11

PCF11 cleavage and polyadenylation factor subunit. (1555 aa)

Predicted Functional Partners:

CLP1

0.997

CSTF3

0.992

CPSF2

0.991

SYMPK

0.989

CPSF3

0.988

CPSF1

0.987

RBBP6

0.941

CSTF2

0.936

ENSBMUP00000012137

0.935

FIP1L1

0.924

Your Current Organism:

Bos mutus

NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLP1	CPSF1	ENSBMUP00000026123	ENSBMUP00000033107	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]	Cleavage and polyadenylation specificity factor subunit 1.	0.830
CLP1	CPSF2	ENSBMUP00000026123	ENSBMUP00000009064	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]	Cleavage and polyadenylation specificity factor subunit 2.	0.886
CLP1	CPSF3	ENSBMUP00000026123	ENSBMUP00000004354	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]	Cleavage and polyadenylation specificity factor subunit 3.	0.910
CLP1	CSTF2	ENSBMUP00000026123	ENSBMUP00000014479	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]	Cleavage stimulation factor subunit 2.	0.926
CLP1	CSTF3	ENSBMUP00000026123	ENSBMUP00000010679	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]	Cleavage stimulation factor subunit 3.	0.905
CLP1	ENSBMUP00000012137	ENSBMUP00000026123	ENSBMUP00000012137	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]	annotation not available	0.890
CLP1	FIP1L1	ENSBMUP00000026123	ENSBMUP00000026558	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]	Pre-mRNA 3'-end-processing factor FIP1.	0.910
CLP1	PCF11	ENSBMUP00000026123	ENSBMUP00000014225	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]	PCF11 cleavage and polyadenylation factor subunit.	0.997
CLP1	SYMPK	ENSBMUP00000026123	ENSBMUP00000025339	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]	Symplekin.	0.750
CPSF1	CLP1	ENSBMUP00000033107	ENSBMUP00000026123	Cleavage and polyadenylation specificity factor subunit 1.	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]	0.830
CPSF1	CPSF2	ENSBMUP00000033107	ENSBMUP00000009064	Cleavage and polyadenylation specificity factor subunit 1.	Cleavage and polyadenylation specificity factor subunit 2.	0.999
CPSF1	CPSF3	ENSBMUP00000033107	ENSBMUP00000004354	Cleavage and polyadenylation specificity factor subunit 1.	Cleavage and polyadenylation specificity factor subunit 3.	0.999
CPSF1	CSTF2	ENSBMUP00000033107	ENSBMUP00000014479	Cleavage and polyadenylation specificity factor subunit 1.	Cleavage stimulation factor subunit 2.	0.960
CPSF1	CSTF3	ENSBMUP00000033107	ENSBMUP00000010679	Cleavage and polyadenylation specificity factor subunit 1.	Cleavage stimulation factor subunit 3.	0.992
CPSF1	ENSBMUP00000012137	ENSBMUP00000033107	ENSBMUP00000012137	Cleavage and polyadenylation specificity factor subunit 1.	annotation not available	0.944
CPSF1	FIP1L1	ENSBMUP00000033107	ENSBMUP00000026558	Cleavage and polyadenylation specificity factor subunit 1.	Pre-mRNA 3'-end-processing factor FIP1.	0.994
CPSF1	PCF11	ENSBMUP00000033107	ENSBMUP00000014225	Cleavage and polyadenylation specificity factor subunit 1.	PCF11 cleavage and polyadenylation factor subunit.	0.987
CPSF1	RBBP6	ENSBMUP00000033107	ENSBMUP00000026889	Cleavage and polyadenylation specificity factor subunit 1.	E3 ubiquitin-protein ligase RBBP6.	0.975
CPSF1	SYMPK	ENSBMUP00000033107	ENSBMUP00000025339	Cleavage and polyadenylation specificity factor subunit 1.	Symplekin.	0.998
CPSF2	CLP1	ENSBMUP00000009064	ENSBMUP00000026123	Cleavage and polyadenylation specificity factor subunit 2.	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]	0.886